EnhancerDB
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  3. rs539798960[chr1:183583192]
Enhancers that have rs539798960[chr1:183583192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183567389 183584375 enh804
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Uterus Heart
Transcript factors that have rs539798960[chr1:183583192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183583181 183583194 SMAD2 JASPAR yes 33692340
chr1 183583185 183583195 SREBF2 JASPAR yes 33692341
chr1 183583187 183583199 GLI2 JASPAR yes 33692342
Genes associated with rs539798960[chr1:183583192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More