EnhancerDB
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  3. rs539832599[chr11:12193084]
Enhancers that have rs539832599[chr11:12193084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12175905 12217435 enh13777
Bone Marrow (K562) Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539832599[chr11:12193084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12193078 12193093 SCRT1 JASPAR yes 37428169
chr11 12193078 12193093 ZIC3 JASPAR yes 37428170
chr11 12193078 12193093 ZIC4 JASPAR yes 37428171
chr11 12193079 12193093 ZIC1 JASPAR yes 37428172
Genes associated with rs539832599[chr11:12193084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More