EnhancerDB
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  3. rs539833921[chr2:232048346]
Enhancers that have rs539833921[chr2:232048346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232042563 232058252 enh19315
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs539833921[chr2:232048346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232048331 232048346 FOXP1 JASPAR yes 81703785
chr2 232048332 232048347 FOXP1 JASPAR yes 81703786
chr2 232048333 232048348 FOXP1 JASPAR yes 81703787
chr2 232048333 232048354 IRF1 JASPAR yes 81703788
chr2 232048334 232048349 FOXP1 JASPAR yes 81703789
chr2 232048334 232048355 IRF1 JASPAR yes 81703790
chr2 232048335 232048350 FOXP1 JASPAR yes 81703791
chr2 232048335 232048356 IRF1 JASPAR yes 81703792
chr2 232048336 232048351 FOXP1 JASPAR yes 81703793
chr2 232048336 232048357 IRF1 JASPAR yes 81703794
chr2 232048337 232048352 FOXP1 JASPAR yes 81703795
chr2 232048337 232048358 IRF1 JASPAR yes 81703796
chr2 232048338 232048353 FOXP1 JASPAR yes 81703797
chr2 232048340 232048355 FOXP1 JASPAR yes 81703798
chr2 232048341 232048362 IRF1 JASPAR yes 81703799
chr2 232048342 232048357 FOXP1 JASPAR yes 81703800
chr2 232048342 232048363 IRF1 JASPAR yes 81703801
chr2 232048343 232048364 IRF1 JASPAR yes 81703802
Genes associated with rs539833921[chr2:232048346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More