EnhancerDB
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  3. rs539854120[chr1:212416028]
Enhancers that have rs539854120[chr1:212416028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs539854120[chr1:212416028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212412449 212416590 ZNF274 GTRD no Bone Marrow (K562) 21378258
chr1 212412765 212416124 ZNF274 GTRD no Bone Marrow (K562) 21378259
chr1 212413400 212416091 ZNF274 GTRD no Bone Marrow (K562) 21378262
chr1 212413668 212416136 ZNF274 GTRD no Bone Marrow (K562) 21378270
chr1 212413726 212416085 ZNF274 GTRD no Cervix (HeLa-S3) 21378272
chr1 212413768 212416110 ZNF143 GTRD no Epithelial (MCF-7) 21378276
chr1 212413769 212416064 ZNF143 GTRD no Epithelial (MCF-7) 21378277
chr1 212414605 212416694 ZNF274 GTRD no Bone Marrow (K562) 21378366
chr1 212414750 212416375 ZNF274 GTRD no Bone Marrow (K562) 21378420
chr1 212415459 212416035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378437
chr1 212415530 212416080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378439
chr1 212415579 212416035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378450
chr1 212415636 212416360 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378458
chr1 212415668 212416028 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378462
chr1 212415736 212416286 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378467
chr1 212415758 212416034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378468
chr1 212415770 212416314 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378470
chr1 212415914 212416118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378471
chr1 212415916 212416132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21378472
chr1 212415959 212416148 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378473
chr1 212416008 212416298 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378474
chr1 212416012 212416312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21378475
chr1 212416025 212416036 USF1 JASPAR yes 35114187
chr1 212416025 212416036 USF2 JASPAR yes 35114188
Genes associated with rs539854120[chr1:212416028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More