EnhancerDB
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  3. rs539862274[chr16:88303775]
Enhancers that have rs539862274[chr16:88303775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs539862274[chr16:88303775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88302520 88304633 TCF7L2 GTRD no Colon (HCT116) 21735726
chr16 88302772 88304701 ZNF143 GTRD no Epithelial (MCF-7) 21735727
chr16 88303266 88303813 TCF7L2 GTRD no Colon (HCT116) 21735728
chr16 88303277 88303857 TCF7L2 GTRD no Colon (HCT116) 21735729
chr16 88303566 88305632 TEF1 GTRD no Bone (Osteoblast) 21735730
chr16 88303659 88305296 ZBTB33 GTRD no Brain (SK-N-SH) 21735731
chr16 88303710 88305083 ZBTB33 GTRD no Brain (SK-N-SH) 21735732
chr16 88303716 88304428 TCF7L2 GTRD no Colon (HCT116) 21735733
chr16 88303772 88305277 ZBTB33 GTRD no Brain (SK-N-SH) 21735734
chr16 88303774 88303786 INSM1 JASPAR yes 12272523
Genes associated with rs539862274[chr16:88303775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More