EnhancerDB
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  3. rs539867089[chr1:40438628]
Enhancers that have rs539867089[chr1:40438628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs539867089[chr1:40438628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40438617 40438637 ESR1 JASPAR yes 28303587
chr1 40438620 40438637 RXRA JASPAR yes 28303588
chr1 40438625 40438639 PLAG1 JASPAR yes 28303589
Genes associated with rs539867089[chr1:40438628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More