EnhancerDB
  1. Home
  2. SNP
  3. rs539874552[chr1:23083173]
Enhancers that have rs539874552[chr1:23083173]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs539874552[chr1:23083173]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23083159 23083173 PLAG1 JASPAR yes 27389208
chr1 23083169 23083189 RREB1 JASPAR yes 27389210
chr1 23083170 23083190 RREB1 JASPAR yes 27389211
chr1 23083171 23083191 RREB1 JASPAR yes 27389212
Genes associated with rs539874552[chr1:23083173], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More