EnhancerDB
  1. Home
  2. SNP
  3. rs539877213[chr16:1348105]
Enhancers that have rs539877213[chr16:1348105]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539877213[chr16:1348105]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 21684673
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 108171370
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 21684676
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 108171372
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 21684680
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 108171375
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 21684682
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 108171377
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 21684684
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 108171379
chr16 1347156 1348182 P63 GTRD no Skin (Keratinocyte) 21684717
chr16 1347156 1348182 P63 GTRD no Skin (Keratinocyte) 108171409
chr16 1347188 1348121 P63 GTRD no Skin (Keratinocyte) 21684718
chr16 1347188 1348121 P63 GTRD no Skin (Keratinocyte) 108171410
chr16 1347294 1348893 ZNF143 GTRD no Epithelial (MCF-7) 21684720
chr16 1347294 1348893 ZNF143 GTRD no Epithelial (MCF-7) 108171412
chr16 1347697 1349345 ZNF143 GTRD no Epithelial (MCF-7) 21684721
chr16 1347946 1348697 TCF7L2 GTRD no Colon (HCT116) 21684722
chr16 1347999 1348938 TCF7L2 GTRD no Colon (HCT116) 21684723
Genes associated with rs539877213[chr16:1348105], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More