EnhancerDB
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  3. rs539879896[chr9:38690801]
Enhancers that have rs539879896[chr9:38690801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 38668660 38692880 enh41890
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Astrocyte Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs539879896[chr9:38690801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 38690780 38690801 REST JASPAR yes 84071528
chr9 38690793 38690804 ELK4 JASPAR yes 84071531
chr9 38690793 38690804 FLI1 JASPAR yes 84071532
chr9 38690793 38690806 ELF3 JASPAR yes 84071533
chr9 38690794 38690804 ETV6 JASPAR yes 84071534
chr9 38690794 38690804 GABPA JASPAR yes 84071535
chr9 38690794 38690805 ELF5 JASPAR yes 84071536
chr9 38690794 38690806 EHF JASPAR yes 84071537
chr9 38690794 38690806 ELF1 JASPAR yes 84071538
chr9 38690794 38690806 ELF4 JASPAR yes 84071539
chr9 38690794 38690807 ELF1 JASPAR yes 84071540
chr9 38690795 38690802 SPI1 JASPAR yes 84071541
chr9 38690795 38690803 EHF JASPAR yes 84071542
chr9 38690795 38690803 FEV JASPAR yes 84071543
Genes associated with rs539879896[chr9:38690801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More