EnhancerDB
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  3. rs539882330[chr14:50347662]
Enhancers that have rs539882330[chr14:50347662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50340390 50353497 enh15588
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs539882330[chr14:50347662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50346947 50348030 ZNF274 GTRD no Bone Marrow (K562) 108100361
chr14 50347200 50348294 ZNF274 GTRD no Bone Marrow (K562) 108100365
chr14 50347411 50348064 ZNF143 GTRD no Epithelial (MCF-7) 21615569
chr14 50347414 50347850 ZNF143 GTRD no Epithelial (MCF-7) 21615570
chr14 50347510 50347780 ZNF143 GTRD no Epithelial (MCF-7) 21615571
chr14 50347531 50348041 ZNF274 GTRD no Cervix (HeLa-S3) 21615572
chr14 50347550 50347857 TCF7L2 GTRD no Colon (HCT116) 21615573
chr14 50347660 50347675 FOXP1 JASPAR yes 115204176
chr14 50347660 50347681 IRF1 JASPAR yes 115204177
Genes associated with rs539882330[chr14:50347662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More