EnhancerDB
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  3. rs539886968[chr5:148980032]
Enhancers that have rs539886968[chr5:148980032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148972625 148988975 enh8792
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs539886968[chr5:148980032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148980025 148980037 PKNOX2 JASPAR yes 66829121
chr5 148980030 148980039 NFIX JASPAR yes 66829122
chr5 148980030 148980040 NFIA JASPAR yes 66829123
chr5 148980032 148980038 NFIC JASPAR yes 66829124
Genes associated with rs539886968[chr5:148980032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More