EnhancerDB
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  3. rs539914142[chr19:958660]
Enhancers that have rs539914142[chr19:958660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs539914142[chr19:958660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 958533 958985 TCF7L2 GTRD no Colon (HCT116) 21831316
chr19 958533 958985 TCF7L2 GTRD no Colon (HCT116) 108349023
chr19 958552 960739 TCF7L2 GTRD no Colon (HCT116) 21831317
chr19 958552 960739 TCF7L2 GTRD no Colon (HCT116) 108349024
chr19 958613 961627 TCF7L2 GTRD no Colon (HCT116) 21831318
chr19 958613 961627 TCF7L2 GTRD no Colon (HCT116) 108349025
chr19 958653 958667 PLAG1 JASPAR yes 111987684
chr19 958660 958665 SP1 TRANSFAC yes 111987685
Genes associated with rs539914142[chr19:958660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More