EnhancerDB
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  3. rs539919769[chr1:203294082]
Enhancers that have rs539919769[chr1:203294082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539919769[chr1:203294082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203293927 203294587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368607
chr1 203293927 203294587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858679
chr1 203294037 203294770 POLR2A UCSC Txn Factor no Conserved 107858680
chr1 203294046 203294744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368608
chr1 203294046 203294744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858681
chr1 203294063 203294499 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368609
chr1 203294063 203294499 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858682
chr1 203294073 203294085 TFAP2A JASPAR yes 34617879
chr1 203294073 203294085 TFAP2B JASPAR yes 34617880
chr1 203294073 203294085 TFAP2C JASPAR yes 34617881
Genes associated with rs539919769[chr1:203294082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More