EnhancerDB
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  3. rs539934499[chr1:202032320]
Enhancers that have rs539934499[chr1:202032320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539934499[chr1:202032320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202031700 202032341 ZNF274 GTRD no Liver (HepG2) 21366214
chr1 202032055 202032436 ZNF143 GTRD no Epithelial (MCF-7) 21366218
chr1 202032135 202032617 ZNF143 GTRD no Epithelial (MCF-7) 21366219
chr1 202032165 202032596 ZNF143 GTRD no Epithelial (MCF-7) 21366220
chr1 202032174 202032455 ZNF143 GTRD no Epithelial (MCF-7) 21366221
chr1 202032188 202032592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366222
chr1 202032256 202032586 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366223
chr1 202032257 202032517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366224
chr1 202032262 202032602 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366225
chr1 202032264 202032584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366226
chr1 202032273 202032613 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366227
chr1 202032276 202032560 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366228
chr1 202032278 202032558 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366229
chr1 202032281 202032571 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366230
chr1 202032284 202032564 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366231
chr1 202032294 202032558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366232
chr1 202032300 202032560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366233
chr1 202032303 202032579 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366234
chr1 202032315 202032695 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366235
chr1 202032317 202032323 SOX10 JASPAR yes 34548165
chr1 202032317 202032558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366236
chr1 202032318 202032598 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366237
chr1 202032319 202032332 SMAD2 JASPAR yes 34548166
Genes associated with rs539934499[chr1:202032320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More