EnhancerDB
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  3. rs539940456[chr2:216834345]
Enhancers that have rs539940456[chr2:216834345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216829705 216842315 enh19209
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539940456[chr2:216834345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216834345 216834349 LFA1 TRANSFAC yes 80825592
Genes associated with rs539940456[chr2:216834345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More