EnhancerDB
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  3. rs539956500[chr16:88268785]
Enhancers that have rs539956500[chr16:88268785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs539956500[chr16:88268785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88268283 88268799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735566
chr16 88268546 88269370 TCF7L2 GTRD no Colon (HCT116) 21735570
chr16 88268769 88268789 TP53 JASPAR yes 12268895
chr16 88268775 88268786 EBF1 JASPAR yes 12268896
Genes associated with rs539956500[chr16:88268785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More