EnhancerDB
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  3. rs539985474[chr1:28775660]
Enhancers that have rs539985474[chr1:28775660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28772305 28780210 enh26592
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
Transcript factors that have rs539985474[chr1:28775660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28775652 28775664 IRF1 JASPAR yes 27772232
chr1 28775652 28775667 FOXP1 JASPAR yes 27772233
chr1 28775654 28775674 RREB1 JASPAR yes 27772234
chr1 28775657 28775677 RREB1 JASPAR yes 27772235
chr1 28775660 28775680 RREB1 JASPAR yes 27772236
Genes associated with rs539985474[chr1:28775660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More