EnhancerDB
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  3. rs539990023[chr2:232516113]
Enhancers that have rs539990023[chr2:232516113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232503025 232517415 enh19322
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539990023[chr2:232516113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232516113 232516125 IRF1 JASPAR yes 81731733
chr2 232516113 232516128 FOXP1 JASPAR yes 81731734
chr2 232516113 232516134 IRF1 JASPAR yes 81731735
Genes associated with rs539990023[chr2:232516113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More