EnhancerDB
  1. Home
  2. SNP
  3. rs540004430[chr12:65184159]
Enhancers that have rs540004430[chr12:65184159]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65181625 65209755 enh14785
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540004430[chr12:65184159]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65184152 65184161 NKX2-8 JASPAR yes 121429432
chr12 65184152 65184162 NKX2-3 JASPAR yes 121429433
chr12 65184153 65184161 ISL2 JASPAR yes 121429434
chr12 65184153 65184162 NKX3-2 JASPAR yes 121429435
Genes associated with rs540004430[chr12:65184159], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More