EnhancerDB
  1. Home
  2. SNP
  3. rs540018230[chr1:226368699]
Enhancers that have rs540018230[chr1:226368699]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226367565 226372375 enh955
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Uterus Epithelial (MCF-7)
Transcript factors that have rs540018230[chr1:226368699]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226368696 226368711 FOXP1 JASPAR yes 35797867
chr1 226368697 226368712 FOXP1 JASPAR yes 35797868
chr1 226368698 226368713 FOXP1 JASPAR yes 35797869
chr1 226368699 226368714 FOXP1 JASPAR yes 35797870
chr1 226368699 226368720 IRF1 JASPAR yes 35797871
Genes associated with rs540018230[chr1:226368699], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More