EnhancerDB
  1. Home
  2. SNP
  3. rs540019289[chr17:48719356]
Enhancers that have rs540019289[chr17:48719356]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48713385 48720742 enh17222
Astrocyte Adrenal Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Muscle (A673)
Transcript factors that have rs540019289[chr17:48719356]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48719350 48719356 MZF1 JASPAR yes 54710317
chr17 48719353 48719368 FOXP1 JASPAR yes 54710318
chr17 48719354 48719369 FOXP1 JASPAR yes 54710319
chr17 48719354 48719375 IRF1 JASPAR yes 54710320
chr17 48719355 48719370 FOXP1 JASPAR yes 54710321
chr17 48719355 48719376 IRF1 JASPAR yes 54710322
chr17 48719356 48719371 FOXP1 JASPAR yes 54710323
Genes associated with rs540019289[chr17:48719356], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More