EnhancerDB
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  3. rs540025053[chr16:27390092]
Enhancers that have rs540025053[chr16:27390092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27372645 27392475 enh16615
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540025053[chr16:27390092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27386265 27390362 ZNF274 GTRD no Blood (GM12878) 21701032
chr16 27386265 27390362 ZNF274 GTRD no Blood (GM12878) 108190573
chr16 27386727 27390703 ZNF274 GTRD no Blood (GM12878) 21701050
chr16 27386739 27390557 ZNF274 GTRD no Blood (GM12878) 21701051
chr16 27387220 27390248 ZNF274 GTRD no Blood (GM12878) 21701053
chr16 27387309 27390174 ZNF274 GTRD no Blood (GM12878) 21701056
chr16 27387423 27390122 ZNF274 GTRD no Blood (GM12878) 21701066
chr16 27389221 27390108 ZNF274 GTRD no Blood (GM12878) 21701111
chr16 27390074 27390095 IRF1 JASPAR yes 10190495
Genes associated with rs540025053[chr16:27390092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More