EnhancerDB
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  3. rs540026062[chr12:104978952]
Enhancers that have rs540026062[chr12:104978952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs540026062[chr12:104978952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104978944 104978963 REST JASPAR yes 123394554
chr12 104978947 104978952 GATA1 TRANSFAC yes 123394556
chr12 104978947 104978953 GATA3 JASPAR yes 123394557
chr12 104978951 104978957 TCF4 TRANSFAC yes 123394558
Genes associated with rs540026062[chr12:104978952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More