EnhancerDB
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  3. rs540029865[chr16:22652805]
Enhancers that have rs540029865[chr16:22652805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 22635405 22654643 enh58701
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Breast Neural Stem Cells (H9)
chr16 22652747 22652805 vista22144
VISTA
Transcript factors that have rs540029865[chr16:22652805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 22652301 22652821 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108188541
chr16 22652791 22652811 TP53 JASPAR yes 9968730
chr16 22652791 22652811 TP53 JASPAR yes 49354951
chr16 22652798 22652808 SMAD3 JASPAR yes 9968731
chr16 22652798 22652808 SMAD3 JASPAR yes 49354952
chr16 22652803 22652809 HiNF-A TRANSFAC yes 9968732
chr16 22652803 22652809 HiNF-A TRANSFAC yes 49354953
chr16 22652805 22652823 RARA JASPAR yes 9968733
chr16 22652805 22652823 RARA JASPAR yes 49354954
Genes associated with rs540029865[chr16:22652805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More