EnhancerDB
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  3. rs540083809[chr1:22602082]
Enhancers that have rs540083809[chr1:22602082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540083809[chr1:22602082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22602074 22602083 SNAI2 JASPAR yes 27358281
chr1 22602074 22602084 TCF3 JASPAR yes 27358282
chr1 22602079 22602096 NR3C1 JASPAR yes 27358283
chr1 22602079 22602096 NR3C2 JASPAR yes 27358284
Genes associated with rs540083809[chr1:22602082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More