EnhancerDB
  1. Home
  2. SNP
  3. rs540094732[chr17:39936084]
Enhancers that have rs540094732[chr17:39936084]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs540094732[chr17:39936084]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39936069 39936088 PAX5 JASPAR yes 54275442
chr17 39936078 39936099 IRF1 JASPAR yes 54275443
chr17 39936079 39936100 IRF1 JASPAR yes 54275444
chr17 39936083 39936098 FOXP1 JASPAR yes 54275445
chr17 39936084 39936099 FOXP1 JASPAR yes 54275446
Genes associated with rs540094732[chr17:39936084], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More