EnhancerDB
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  3. rs540156426[chr4:148973490]
Enhancers that have rs540156426[chr4:148973490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148970716 148983995 enh8265
Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
chr4 148973160 148977273 vista1277
VISTA
Transcript factors that have rs540156426[chr4:148973490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148973481 148973492 NFIL3 JASPAR yes 36750
chr4 148973481 148973492 NFIL3 JASPAR yes 93544314
chr4 148973482 148973494 DBP JASPAR yes 36751
chr4 148973482 148973494 HLF JASPAR yes 36752
chr4 148973482 148973494 DBP JASPAR yes 93544315
chr4 148973482 148973494 HLF JASPAR yes 93544316
chr4 148973483 148973495 POU2F1 JASPAR yes 36753
chr4 148973483 148973495 POU2F1 JASPAR yes 93544317
chr4 148973483 148973496 POU3F3 JASPAR yes 36754
chr4 148973483 148973496 POU3F3 JASPAR yes 93544318
chr4 148973483 148973497 POU1F1 JASPAR yes 36755
chr4 148973483 148973497 POU1F1 JASPAR yes 93544319
chr4 148973483 148973498 FOXP1 JASPAR yes 36756
chr4 148973483 148973498 FOXP1 JASPAR yes 93544320
chr4 148973484 148973496 POU3F1 JASPAR yes 36757
chr4 148973484 148973496 POU3F2 JASPAR yes 36758
chr4 148973484 148973496 POU3F1 JASPAR yes 93544321
chr4 148973484 148973496 POU3F2 JASPAR yes 93544322
chr4 148973484 148973497 POU2F2 JASPAR yes 36759
chr4 148973484 148973497 POU2F2 JASPAR yes 93544323
chr4 148973485 148973493 FOXL1 JASPAR yes 36760
chr4 148973485 148973493 FOXL1 JASPAR yes 93544324
chr4 148973485 148973494 POU5F1B JASPAR yes 36761
chr4 148973485 148973494 POU5F1B JASPAR yes 93544325
chr4 148973488 148973503 FOXP1 JASPAR yes 36762
chr4 148973488 148973503 FOXP1 JASPAR yes 93544326
chr4 148973489 148973495 TBP TRANSFAC yes 36763
chr4 148973489 148973495 TBP TRANSFAC yes 93544327
chr4 148973489 148973504 FOXP1 JASPAR yes 36764
chr4 148973489 148973504 FOXP1 JASPAR yes 93544328
chr4 148973489 148973510 IRF1 JASPAR yes 36765
chr4 148973489 148973510 IRF1 JASPAR yes 93544329
chr4 148973490 148973505 FOXP1 JASPAR yes 36766
chr4 148973490 148973505 FOXP1 JASPAR yes 93544330
chr4 148973490 148973511 IRF1 JASPAR yes 36767
chr4 148973490 148973511 IRF1 JASPAR yes 93544331
Genes associated with rs540156426[chr4:148973490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More