EnhancerDB
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  3. rs540162424[chr8:11313834]
Enhancers that have rs540162424[chr8:11313834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 11281762 11322135 enh10162
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Heart
chr8 11312887 11313950 vista58222
VISTA
Transcript factors that have rs540162424[chr8:11313834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 11313820 11313840 RREB1 JASPAR yes 43135473
chr8 11313820 11313840 RREB1 JASPAR yes 68315281
chr8 11313830 11313850 RREB1 JASPAR yes 43135474
chr8 11313830 11313850 RREB1 JASPAR yes 68315282
chr8 11313834 11313854 RREB1 JASPAR yes 43135475
chr8 11313834 11313854 RREB1 JASPAR yes 68315283
Genes associated with rs540162424[chr8:11313834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More