EnhancerDB
  1. Home
  2. SNP
  3. rs540205245[chr6:41678218]
Enhancers that have rs540205245[chr6:41678218]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540205245[chr6:41678218]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41678208 41678218 HMBOX1 JASPAR yes 101667788
Genes associated with rs540205245[chr6:41678218], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More