EnhancerDB
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  3. rs540224680[chr16:11175831]
Enhancers that have rs540224680[chr16:11175831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540224680[chr16:11175831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11175821 11175838 ESR1 JASPAR yes 9484387
chr16 11175821 11175839 ESR2 JASPAR yes 9484388
chr16 11175825 11175839 TLX1 JASPAR yes 9484389
Genes associated with rs540224680[chr16:11175831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More