EnhancerDB
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  3. rs540228280[chr14:56051704]
Enhancers that have rs540228280[chr14:56051704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 56037325 56062723 enh3218
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Liver Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540228280[chr14:56051704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 56051685 56051706 IRF1 JASPAR yes 115561223
chr14 56051691 56051706 MEF2C JASPAR yes 115561224
chr14 56051692 56051707 MEF2A JASPAR yes 115561225
chr14 56051693 56051705 MEF2A JASPAR yes 115561229
chr14 56051693 56051705 MEF2B JASPAR yes 115561230
chr14 56051693 56051705 MEF2D JASPAR yes 115561231
chr14 56051694 56051704 MEF2A JASPAR yes 115561232
Genes associated with rs540228280[chr14:56051704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More