EnhancerDB
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  3. rs540235077[chr6:41698526]
Enhancers that have rs540235077[chr6:41698526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540235077[chr6:41698526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41698218 41698662 GATA2 UCSC Txn Factor no Conserved 108540189
chr6 41698520 41698533 SMAD2 JASPAR yes 101670346
Genes associated with rs540235077[chr6:41698526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More