EnhancerDB
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  3. rs540254348[chr7:129651108]
Enhancers that have rs540254348[chr7:129651108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 129645365 129654315 enh24506
Bone Marrow (K562) Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs540254348[chr7:129651108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 129651097 129651110 ZBTB18 JASPAR yes 17998285
chr7 129651098 129651108 ID4 JASPAR yes 17998286
chr7 129651098 129651108 TCF3 JASPAR yes 17998287
chr7 129651098 129651108 TCF4 JASPAR yes 17998288
chr7 129651102 129651123 IRF1 JASPAR yes 17998290
chr7 129651104 129651119 STAT2 JASPAR yes 17998291
chr7 129651104 129651125 IRF1 JASPAR yes 17998292
chr7 129651105 129651126 IRF1 JASPAR yes 17998293
chr7 129651106 129651127 IRF1 JASPAR yes 17998294
chr7 129651107 129651122 FOXP1 JASPAR yes 17998295
chr7 129651107 129651128 IRF1 JASPAR yes 17998296
chr7 129651108 129651123 FOXP1 JASPAR yes 17998297
chr7 129651108 129651129 IRF1 JASPAR yes 17998298
Genes associated with rs540254348[chr7:129651108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More