EnhancerDB
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  3. rs540278471[chr1:153570374]
Enhancers that have rs540278471[chr1:153570374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153567604 153573987 enh628
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540278471[chr1:153570374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153570363 153570384 IRF1 JASPAR yes 32261789
chr1 153570364 153570379 FOXP1 JASPAR yes 32261791
chr1 153570364 153570385 IRF1 JASPAR yes 32261792
chr1 153570368 153570389 IRF1 JASPAR yes 32261793
chr1 153570369 153570384 FOXP1 JASPAR yes 32261794
chr1 153570372 153570386 STAT1 JASPAR yes 32261795
chr1 153570372 153570387 STAT2 JASPAR yes 32261796
Genes associated with rs540278471[chr1:153570374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More