EnhancerDB
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  3. rs540280569[chr1:16434882]
Enhancers that have rs540280569[chr1:16434882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs540280569[chr1:16434882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16434870 16434883 EOMES JASPAR yes 27025246
chr1 16434878 16434889 E2F4 JASPAR yes 27025253
chr1 16434878 16434889 E2F6 JASPAR yes 27025254
chr1 16434880 16434888 E2F1 JASPAR yes 27025255
chr1 16434881 16434889 FEV JASPAR yes 27025256
Genes associated with rs540280569[chr1:16434882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More