EnhancerDB
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  3. rs540309554[chr1:108588786]
Enhancers that have rs540309554[chr1:108588786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108582385 108602455 enh12117
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Placenta Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540309554[chr1:108588786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108588786 108588790 ESR1 TRANSFAC yes 31379411
chr1 108588786 108588797 USF1 JASPAR yes 31379412
chr1 108588786 108588797 USF2 JASPAR yes 31379413
Genes associated with rs540309554[chr1:108588786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More