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- rs540311566[chr1:3278960]
Enhancers that have rs540311566[chr1:3278960]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
3260385 |
3279675 |
enh42858 |
|
|
Transcript factors that have rs540311566[chr1:3278960]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
3278160
|
3279982
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801854
|
|
|
chr1
|
3278948
|
3278963
|
ZIC4
|
JASPAR
|
yes
|
|
26284835
|
|
|
chr1
|
3278948
|
3278963
|
ZIC4
|
JASPAR
|
yes
|
|
118218333
|
|
|
chr1
|
3278949
|
3278963
|
ZIC1
|
JASPAR
|
yes
|
|
26284836
|
|
|
chr1
|
3278949
|
3278963
|
ZIC1
|
JASPAR
|
yes
|
|
118218334
|
|
|
chr1
|
3278955
|
3278960
|
SP1
|
TRANSFAC
|
yes
|
|
26284837
|
|
|
chr1
|
3278959
|
3278963
|
ESR1
|
TRANSFAC
|
yes
|
|
26284838
|
|
|
chr1
|
3278959
|
3278963
|
ESR1
|
TRANSFAC
|
yes
|
|
118218335
|
|
Genes associated with rs540311566[chr1:3278960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |