EnhancerDB
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  3. rs540336130[chr16:1771857]
Enhancers that have rs540336130[chr16:1771857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540336130[chr16:1771857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1771841 1771862 ZNF263 JASPAR yes 9158769
chr16 1771848 1771860 HINFP JASPAR yes 9158770
chr16 1771852 1771860 SP1 TRANSFAC yes 9158771
chr16 1771852 1771862 SP1 JASPAR yes 9158772
Genes associated with rs540336130[chr16:1771857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More