EnhancerDB
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  3. rs540344003[chr19:2504344]
Enhancers that have rs540344003[chr19:2504344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540344003[chr19:2504344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2503012 2504843 TCF7L2 GTRD no Colon (HCT116) 108360665
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 21835775
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 108360668
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 21835776
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 108360669
chr19 2503285 2504377 ZBTB33 GTRD no Lung (A549) 108360672
chr19 2503308 2504398 ZNF274 GTRD no Blood (GM12878) 108360676
chr19 2503312 2504522 ZNF274 GTRD no Cervix (HeLa-S3) 21835780
chr19 2503312 2504522 ZNF274 GTRD no Cervix (HeLa-S3) 108360677
chr19 2503326 2504402 ZNF274 GTRD no Bone Marrow (K562) 21835781
chr19 2503326 2504402 ZNF274 GTRD no Bone Marrow (K562) 108360678
chr19 2503348 2504493 ZNF274 GTRD no Blood (GM12878) 108360683
chr19 2503360 2504532 TCF7L2 GTRD no Colon (HCT116) 108360684
chr19 2503503 2504378 ZNF274 GTRD no Blood (GM12878) 108360711
chr19 2503577 2504659 TCF7L2 GTRD no Colon (HCT116) 108360721
chr19 2503644 2504390 ZNF274 GTRD no Blood (GM12878) 108360726
chr19 2503695 2504372 ZNF274 GTRD no Bone Marrow (K562) 21835821
chr19 2503695 2504372 ZNF274 GTRD no Bone Marrow (K562) 108360737
chr19 2503771 2504427 ZNF274 GTRD no Blood (GM12878) 108360747
chr19 2504096 2504375 ZNF274 GTRD no Blood (GM12878) 108360755
chr19 2504343 2504347 H4TF2 TRANSFAC yes 112067621
Genes associated with rs540344003[chr19:2504344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More