EnhancerDB
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  3. rs540385733[chr6:11142246]
Enhancers that have rs540385733[chr6:11142246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11136225 11148938 enh23013
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Placenta Colon (HCT116) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540385733[chr6:11142246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11142243 11142258 FOXP1 JASPAR yes 99859142
chr6 11142244 11142259 FOXP1 JASPAR yes 99859143
chr6 11142245 11142260 FOXP1 JASPAR yes 99859144
chr6 11142245 11142266 IRF1 JASPAR yes 99859145
chr6 11142246 11142261 FOXP1 JASPAR yes 99859146
chr6 11142246 11142267 IRF1 JASPAR yes 99859147
Genes associated with rs540385733[chr6:11142246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More