EnhancerDB
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  3. rs540389020[chr12:58809001]
Enhancers that have rs540389020[chr12:58809001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58804159 58816575 enh29596
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Pancreas (Panc1) Lung (PC-9) Breast Spleen Epithelial (MCF-7)
Transcript factors that have rs540389020[chr12:58809001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58808957 58810176 AR GTRD no Prostate (PC-3) 21551994
chr12 58808997 58809011 IRF8 JASPAR yes 121172106
chr12 58808998 58809013 STAT2 JASPAR yes 121172107
chr12 58808998 58809016 IRF2 JASPAR yes 121172108
Genes associated with rs540389020[chr12:58809001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More