EnhancerDB
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  3. rs540392477[chr16:383065]
Enhancers that have rs540392477[chr16:383065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs540392477[chr16:383065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 380393 383125 ZNF274 GTRD no Bone Marrow (K562) 21683888
chr16 380393 383125 ZNF274 GTRD no Bone Marrow (K562) 108170284
chr16 380499 384534 ZNF143 GTRD no Epithelial (MCF-7) 21683891
chr16 380499 384534 ZNF143 GTRD no Epithelial (MCF-7) 108170287
chr16 380578 383162 ZNF274 GTRD no Blood (GM12878) 108170292
chr16 380814 384507 ZNF274 GTRD no Blood (GM12878) 108170315
chr16 381628 383142 ZBTB33 GTRD no Lung (A549) 108170382
Genes associated with rs540392477[chr16:383065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More