EnhancerDB
  1. Home
  2. SNP
  3. rs540393959[chr19:3072885]
Enhancers that have rs540393959[chr19:3072885]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3068462 3082555 enh17858
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs540393959[chr19:3072885]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3072588 3074112 ZNF274 GTRD no Bone Marrow (K562) 21838493
chr19 3072755 3073725 ZNF274 GTRD no Bone Marrow (K562) 21838494
chr19 3072818 3074713 ZNF274 GTRD no Bone Marrow (K562) 21838495
chr19 3072822 3073643 ZNF274 GTRD no Bone Marrow (K562) 21838496
chr19 3072857 3073655 ZNF274 GTRD no Bone Marrow (K562) 21838497
chr19 3072878 3072898 PPARG JASPAR yes 112108968
chr19 3072880 3072898 ESR2 JASPAR yes 112108969
chr19 3072881 3072896 ESR2 JASPAR yes 112108970
chr19 3072881 3073982 ZNF274 GTRD no Bone Marrow (K562) 21838498
chr19 3072882 3072887 GATA2 JASPAR yes 112108971
Genes associated with rs540393959[chr19:3072885], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More