EnhancerDB
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  3. rs540399648[chr12:93517966]
Enhancers that have rs540399648[chr12:93517966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 93499545 93526304 enh14896
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540399648[chr12:93517966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 93517195 93518087 ZNF143 GTRD no Epithelial (MCF-7) 21564071
chr12 93517196 93518063 ZNF143 GTRD no Epithelial (MCF-7) 21564072
chr12 93517273 93518082 ZNF143 GTRD no Epithelial (MCF-7) 21564073
chr12 93517952 93517967 SCRT1 JASPAR yes 122822049
chr12 93517954 93517967 SCRT2 JASPAR yes 122822056
chr12 93517960 93517981 ZNF263 JASPAR yes 122822059
chr12 93517963 93517984 ZNF263 JASPAR yes 122822060
chr12 93517966 93517987 ZNF263 JASPAR yes 122822061
Genes associated with rs540399648[chr12:93517966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More