EnhancerDB
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  3. rs540401682[chr3:185448384]
Enhancers that have rs540401682[chr3:185448384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185440105 185457635 enh36218
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs540401682[chr3:185448384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185448374 185448384 SP1 JASPAR yes 8281357
chr3 185448374 185448393 PAX5 JASPAR yes 8281358
chr3 185448382 185448397 MEF2A JASPAR yes 8281360
chr3 185448383 185448398 MEF2C JASPAR yes 8281361
Genes associated with rs540401682[chr3:185448384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More