EnhancerDB
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  3. rs540415953[chr6:29728910]
Enhancers that have rs540415953[chr6:29728910]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29723175 29734975 enh59606
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9)
Transcript factors that have rs540415953[chr6:29728910]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29728889 29728910 IRF1 JASPAR yes 101008165
chr6 29728890 29728911 IRF1 JASPAR yes 101008167
chr6 29728891 29728912 IRF1 JASPAR yes 101008169
chr6 29728892 29728913 IRF1 JASPAR yes 101008171
chr6 29728894 29728915 IRF1 JASPAR yes 101008174
chr6 29728895 29728910 FOXP1 JASPAR yes 101008175
chr6 29728895 29728916 IRF1 JASPAR yes 101008176
chr6 29728896 29728911 FOXP1 JASPAR yes 101008177
Genes associated with rs540415953[chr6:29728910], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More