EnhancerDB
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  3. rs540417311[chr1:154458192]
Enhancers that have rs540417311[chr1:154458192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs540417311[chr1:154458192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154458186 154458199 ATF4 JASPAR yes 32295747
chr1 154458189 154458200 PHOX2A JASPAR yes 32295748
Genes associated with rs540417311[chr1:154458192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More