EnhancerDB
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  3. rs540420821[chr12:65921577]
Enhancers that have rs540420821[chr12:65921577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65910512 65934055 enh14789
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus
Transcript factors that have rs540420821[chr12:65921577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65921112 65922239 TCF7L2 GTRD no Colon (HCT116) 21553004
chr12 65921563 65921578 AR JASPAR yes 121467066
chr12 65921563 65921580 NR3C1 JASPAR yes 121467067
chr12 65921563 65921580 NR3C2 JASPAR yes 121467068
chr12 65921564 65921579 HSF1 JASPAR yes 121467069
Genes associated with rs540420821[chr12:65921577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More