EnhancerDB
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  3. rs540421791[chr17:44139472]
Enhancers that have rs540421791[chr17:44139472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 44127185 44143079 enh32208
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540421791[chr17:44139472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 44139456 44139477 IRF1 JASPAR yes 54476044
chr17 44139457 44139472 FOXP1 JASPAR yes 54476045
chr17 44139457 44139478 IRF1 JASPAR yes 54476046
chr17 44139458 44139473 FOXP1 JASPAR yes 54476047
chr17 44139458 44139479 IRF1 JASPAR yes 54476048
chr17 44139459 44139474 FOXP1 JASPAR yes 54476049
chr17 44139459 44139480 IRF1 JASPAR yes 54476050
chr17 44139460 44139475 FOXP1 JASPAR yes 54476051
chr17 44139460 44139481 IRF1 JASPAR yes 54476052
chr17 44139461 44139476 FOXP1 JASPAR yes 54476053
chr17 44139463 44139478 FOXP1 JASPAR yes 54476054
chr17 44139464 44139479 STAT2 JASPAR yes 54476055
chr17 44139465 44139480 FOXP1 JASPAR yes 54476056
chr17 44139467 44139479 FOXC2 JASPAR yes 54476057
chr17 44139467 44139487 RREB1 JASPAR yes 54476058
chr17 44139468 44139479 FOXP2 JASPAR yes 54476059
chr17 44139469 44139484 FOXP1 JASPAR yes 54476060
chr17 44139470 44139481 FOXA1 JASPAR yes 54476061
chr17 44139470 44139485 FOXA1 JASPAR yes 54476062
chr17 44139471 44139483 FOXC2 JASPAR yes 54476063
chr17 44139471 44139491 RREB1 JASPAR yes 54476064
chr17 44139472 44139484 FOXI1 JASPAR yes 54476065
chr17 44139472 44139492 RREB1 JASPAR yes 54476066
Genes associated with rs540421791[chr17:44139472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More