EnhancerDB
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  3. rs540422380[chr6:109614402]
Enhancers that have rs540422380[chr6:109614402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109611505 109631621 enh23489
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs540422380[chr6:109614402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109614387 109614402 FOXP1 JASPAR yes 104240047
chr6 109614387 109614402 HNF1A JASPAR yes 104240048
chr6 109614388 109614402 POU4F1 JASPAR yes 104240049
chr6 109614390 109614402 FOXI1 JASPAR yes 104240054
chr6 109614393 109614404 PHOX2A JASPAR yes 104240055
chr6 109614393 109614404 PROP1 JASPAR yes 104240056
chr6 109614398 109614409 PHOX2A JASPAR yes 104240057
chr6 109614398 109614409 PROP1 JASPAR yes 104240058
chr6 109614400 109614414 ONECUT3 JASPAR yes 104240059
chr6 109614400 109614415 HNF1A JASPAR yes 104240060
chr6 109614401 109614414 HNF1B JASPAR yes 104240061
chr6 109614401 109614415 POU4F1 JASPAR yes 104240062
chr6 109614401 109614417 POU4F2 JASPAR yes 104240063
chr6 109614401 109614417 POU4F3 JASPAR yes 104240064
chr6 109614402 109614413 FOXB1 JASPAR yes 104240065
chr6 109614402 109614413 FOXC1 JASPAR yes 104240066
chr6 109614402 109614413 PROP1 JASPAR yes 104240067
chr6 109614402 109614414 FOXC2 JASPAR yes 104240068
chr6 109614402 109614418 POU4F3 JASPAR yes 104240069
Genes associated with rs540422380[chr6:109614402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More